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mrna profiles from illumina ht-12 v3 microarrays  (Illumina Inc)


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    Illumina Inc mrna profiles from illumina ht-12 v3 microarrays
    Mrna Profiles From Illumina Ht 12 V3 Microarrays, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mrna+microarray+profiling/gene+expression+data/pm39447572-496-4-7
    Average 90 stars, based on 1 article reviews
    mrna profiles from illumina ht-12 v3 microarrays - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: Whole-cell cancer vaccines and methods for selection thereof
    Article Snippet: .. Furthermore, even though SV-BR-1-GM cells were engineered to express CSF2 (i.e., which encodes GM-CSF), CSF2 transcripts were not detected by Illumina® microarray gene expression profiling. .. Furthermore, even though SV-BR-1-GM cells were engineered to express CSF2 (i.e., which encodes GM-CSF), CSF2 transcripts were not detected by Illumina microarray gene expression profiling.

    Article Title: Activating transcription factor-2 (ATF2) is a key determinant of resistance to endocrine treatment in an in vitro model of breast cancer
    Article Snippet: .. We also performed a microarray gene expression profiling (Illumina Human HT12_v4) to explore alterations in gene expression between MCF7 and TAMRs after ATF2 silencing and confirmed gene expression changes by quantitative RT-PCR. ..

    Gene Expression:

    Article Title: Whole-cell cancer vaccines and methods for selection thereof
    Article Snippet: .. Furthermore, even though SV-BR-1-GM cells were engineered to express CSF2 (i.e., which encodes GM-CSF), CSF2 transcripts were not detected by Illumina® microarray gene expression profiling. .. Furthermore, even though SV-BR-1-GM cells were engineered to express CSF2 (i.e., which encodes GM-CSF), CSF2 transcripts were not detected by Illumina microarray gene expression profiling.

    Article Title: Activating transcription factor-2 (ATF2) is a key determinant of resistance to endocrine treatment in an in vitro model of breast cancer
    Article Snippet: .. We also performed a microarray gene expression profiling (Illumina Human HT12_v4) to explore alterations in gene expression between MCF7 and TAMRs after ATF2 silencing and confirmed gene expression changes by quantitative RT-PCR. ..

    other:

    Article Title: Disruption of the Igf2 gene alters hepatic lipid homeostasis and gene expression in the newborn mouse
    Article Snippet: Gene expression profiling with Illumina Mouse WG-6 v2.0 Expression Beadchip arrays was performed in three different livers from each of the two genotypes by the Children’s Hospital Boston Microarray Core Facility.

    Article Title: The dysregulated expression and functional effect of CaMK2 in cancer
    Article Snippet: Total genome gene expression profiling is investigated using Illumina HT-12 V4.0 Expression Beadchip oligonucleotide microarray , CaMK2γ expression is significantly reduced in rectal cancer tissues compared with colon cancer tissues , [ ] .

    Article Title: Working Towards a Blood-Derived Gene Expression Biomarker Specific for Alzheimer’s Disease
    Article Snippet: Study inclusion criteria were: 1) microarray gene expression profiling must be performed on a related, common elderly health, or mental health disorder; 2) RNA was extracted from whole blood or a component of blood; 3) study must contain at least ten human subjects; and 4) data was generated on either the Illumina or Affymetrix microarray platform using an expression BeadArray containing at least 20,000 probes.

    Article Title: Relationship closeness buffers the effects of perceived stress on transcriptomic indicators of cellular stress and biological aging marker p16 INK4a
    Article Snippet: RNA samples were assayed in a single batch using microarray-based genome-wide transcriptome profiling (Illumina Human HT-12 v4 BeadArrays) following the manufacturer’s standard protocol in the UCLA Neuroscience Genomics Core Laboratory.

    Article Title: Notch2 controls developmental fate choices between germinal center and marginal zone B cells upon immunization
    Article Snippet: The data are extracted from an Illumina Microarray-based gene expression profiling described in the thesis of S. Ehrenberg (available from 10.5282/edoc.19322) and are available at . d MFIs of H2B-Venus and Hes1 in FoB (gray), pre-MZB (blue), and MZB (red) cells, which were gated as shown in the contour plot (left).

    Quantitative RT-PCR:

    Article Title: Activating transcription factor-2 (ATF2) is a key determinant of resistance to endocrine treatment in an in vitro model of breast cancer
    Article Snippet: .. We also performed a microarray gene expression profiling (Illumina Human HT12_v4) to explore alterations in gene expression between MCF7 and TAMRs after ATF2 silencing and confirmed gene expression changes by quantitative RT-PCR. ..



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    Image Search Results


    Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    microRNA and gene expression microarray datasets related to idiopathic pulmonary fibrosis.

    Journal: Mediators of Inflammation

    Article Title: Analysis of Microarray-Identified Genes and MicroRNAs Associated with Idiopathic Pulmonary Fibrosis

    doi: 10.1155/2017/1804240

    Figure Lengend Snippet: microRNA and gene expression microarray datasets related to idiopathic pulmonary fibrosis.

    Article Snippet: Microarray data from IPF-related microRNA and mRNA expression profiles were retrieved and downloaded from the National Center for Biotechnology Information (NCBI) GEO database ( http://www.ncbi.nlmNih.gov/geo ).

    Techniques: Expressing, Microarray

    Construction of circRNA associated ceRNA network. Green circle: upregulated circRNAs; red circle: downregulated circRNAs; blue circle: miRNAs; purple circle: upregulated mRNAs; deep blue circle: downregulated mRNAs.

    Journal: Computational and Mathematical Methods in Medicine

    Article Title: Construction of circRNA-Associated ceRNA Network Reveals Novel Biomarkers for Esophageal Cancer

    doi: 10.1155/2020/7958362

    Figure Lengend Snippet: Construction of circRNA associated ceRNA network. Green circle: upregulated circRNAs; red circle: downregulated circRNAs; blue circle: miRNAs; purple circle: upregulated mRNAs; deep blue circle: downregulated mRNAs.

    Article Snippet: An Agilent circRNA and mRNA expression profile microarray was used to screen the differentially expressed circRNA and mRNA gene expression.

    Techniques: